Search Result
Gene id | 28 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Gene Summary SNPs Protein Summary Gene ontology KEGG pathways Diseases PubMed | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene Summary |
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Gene Symbol | ABO Gene UCSC Ensembl | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Aliases | A3GALNT, A3GALT1, GTB, NAGAT | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene name | ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alternate names | histo-blood group ABO system transferase, ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase), B(A) alpha-1,3-galactosyltransferase, histo-blood group A2 transferase, | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene location |
9q34.2 (133275200: 133250400) Exons: 7 NC_000009.12 |
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Gene summary(Entrez) |
This gene encodes proteins related to the first discovered blood group system, ABO. Variation in the ABO gene (chromosome 9q34.2) is the basis of the ABO blood group, thus the presence of an allele determines the blood group in an individual. The 'O' bloo |
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OMIM | 611108 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SNPs |
rs868256749 Strand: Allele origin: Allele change: Mutation type: snv NC_000012.12 g.63617303C>T NC_000012.11 g.64011083C>T NG_031909.1 g.56272G>A|SEQ=[C/T]|GENE=DPY19L2 rs751879424 Strand: Allele origin: Allele change: Mutation type: del NC_000012.12 g.63617339del NC_000012.11 g.64011119del NG_031909.1 g.56236del NM_173812.4 c.1183del NM_173812.5 c.1183del XM_011538218.3 c.172del XR_001748666.2 n.1335del XM_006719352.2 c.754del XM_017019192.2 c.1033del XM_017019203.2 c.238del XM_0170 rs587777206 Strand: Allele origin: Allele change: Mutation type: snv NC_000012.12 g.63624101G>A NC_000012.11 g.64017881G>A NG_031909.1 g.49474C>T NM_173812.4 c.892C>T NM_173812.5 c.892C>T XR_001748666.2 n.1044C>T XM_006719352.2 c.463C>T XM_017019193.2 c.589C>T XM_011538215.2 c.379C>T XR_002957317.1 n.1044C>T XR_002957 rs587777205 Strand: Allele origin: Allele change: Mutation type: snv NC_000012.12 g.63569312T>A NC_000012.12 g.63569312T>G NC_000012.11 g.63963092T>A NC_000012.11 g.63963092T>G NG_031909.1 g.104263A>T NG_031909.1 g.104263A>C NM_173812.4 c.2038A>T NM_173812.4 c.2038A>C NM_173812.5 c.2038A>T NM_173812.5 c.2038A>C XM_011 rs587777160 Strand: Allele origin: Allele change: Mutation type: snv NC_000020.11 g.440344C>T NC_000020.10 g.420988C>T NG_034082.1 g.27210G>A NM_144628.3 c.672G>A NM_144628.4 c.672G>A NM_144628.2 c.672G>A NR_111901.1 n.820G>A XM_006723540.3 c.486G>A XM_005260661.1 c.672G>A XM_017027645.1 c.486G>A NP_653229.1 p.Trp224T rs587777159 Strand: Allele origin: Allele change: Mutation type: delins NC_000020.11 g.442029_442030del NC_000020.10 g.422673_422674del NG_034082.1 g.25525_25526del NM_144628.3 c.352_353del NM_144628.4 c.352_353del NM_144628.2 c.352_353del NR_111901.1 n.500_501del XM_006723540.3 c.166_167del XM_005260661.1 c.352_353del X rs587777158 Strand: Allele origin: Allele change: Mutation type: snv NC_000020.11 g.445095G>A NC_000020.10 g.425739G>A NG_034082.1 g.22459C>T NM_144628.3 c.292C>T NM_144628.4 c.292C>T NM_144628.2 c.292C>T NR_111901.1 n.440C>T XM_006723540.3 c.106C>T XM_005260661.1 c.292C>T XM_017027645.1 c.106C>T NP_653229.1 p.Gln98Te rs587777157 Strand: Allele origin: Allele change: Mutation type: snv NC_000020.11 g.447946G>A NC_000020.10 g.428590G>A NG_034082.1 g.19608C>T NM_144628.3 c.199C>T NM_144628.4 c.199C>T NM_144628.2 c.199C>T NR_111901.1 n.347C>T XM_005260661.1 c.199C>T NP_653229.1 p.Arg67Ter XP_005260718.1 p.Arg67Ter|SEQ=[G/A]|GENE=TBC1D rs147579680 Strand: Allele origin: Allele change: Mutation type: snv NC_000012.12 g.63624124C>T NC_000012.11 g.64017904C>T NG_031909.1 g.49451G>A NM_173812.4 c.869G>A NM_173812.5 c.869G>A XR_001748666.2 n.1021G>A XM_006719352.2 c.440G>A XM_017019193.2 c.566G>A XM_011538215.2 c.356G>A XR_002957317.1 n.1021G>A XR_002957 rs62180545 Strand: Allele origin: Allele change: Mutation type: snv NC_000002.12 g.216859821A>G NC_000002.11 g.217724544A>G|SEQ=[A/G]|GENE=TNP1 LOC101928278 101928278 rs55763075 Strand: Allele origin: Allele change: Mutation type: snv NC_000001.11 g.11790377C>T NC_000001.10 g.11850434C>T NG_013351.1 g.20727G>A NM_005957.5 c.*303G>A NM_005957.4 c.*303G>A NM_001330358.1 c.*303G>A XM_005263460.5 c.*303G>A XM_005263460.1 c.*303G>A XM_005263463.4 c.*303G>A XM_005263463.1 c.*303G>A XM_0 rs11677854 Strand: Allele origin: Allele change: Mutation type: snv NC_000002.12 g.48664148C>T NC_000002.11 g.48891287C>T NG_033050.2 g.139224C>T NG_033050.1 g.139224C>T|SEQ=[C/T]|GENE=GTF2A1L STON1-GTF2A1L 286749 rs4045481 Strand: Allele origin: Allele change: Mutation type: snv NC_000004.12 g.1096837G>A NC_000004.11 g.1090625G>A NG_027812.2 g.21958C>T NG_027812.1 g.21728C>T NM_001131034.4 c.174C>T NM_001131034.3 c.174C>T NM_194439.4 c.174C>T NM_001193318.3 c.174C>T NM_001193318.2 c.174C>T NR_159501.1 n.486C>T NR_159498.1 n. rs2231599 Strand: Allele origin: Allele change: Mutation type: snv NC_000001.11 g.86574546A>G NC_000001.10 g.87040229A>G NM_012128.4 c.1474A>G NM_012128.3 c.1474A>G XM_011541015.2 c.1321A>G NR_024602.1 n.1409A>G NR_024602.2 n.1407A>G NP_036260.2 p.Ser492Gly XP_011539317.1 p.Ser441Gly|SEQ=[A/G]|GENE=CLCA4 CLCA4 rs757230 Strand: Allele origin: Allele change: Mutation type: snv NC_000019.10 g.1102132A>G NC_000019.9 g.1102131A>G NG_050621.1 g.3207A>G|SEQ=[A/G]|GENE=GPX4 rs757229 Strand: Allele origin: Allele change: Mutation type: snv NC_000019.10 g.1102115G>A NC_000019.10 g.1102115G>C NC_000019.10 g.1102115G>T NC_000019.9 g.1102114G>A NC_000019.9 g.1102114G>C NC_000019.9 g.1102114G>T NG_050621.1 g.3190G>A NG_050621.1 g.3190G>C NG_050621.1 g.3190G>T|SEQ=[G/A/C/T]|GENE=GPX4 rs718772 Strand: Allele origin: Allele change: Mutation type: snv NC_000022.11 g.30108218A>C NC_000022.11 g.30108218A>G NC_000022.10 g.30504207A>C NC_000022.10 g.30504207A>G|SEQ=[A/C/G]|GENE=HORMAD2 rs12348 Strand: Allele origin: Allele change: Mutation type: snv NC_000009.12 g.25677217T>C NC_000009.12 g.25677217T>G NC_000009.11 g.25677215T>C NC_000009.11 g.25677215T>G NG_012031.1 g.6642A>G NG_012031.1 g.6642A>C NM_001004125.2 c.*466A>G NM_001004125.2 c.*466A>C|SEQ=[T/C/G]|GENE=TUSC1 rs7371084 Strand: Allele origin: Allele change: Mutation type: snv NC_000002.12 g.48712814T>C NC_000002.11 g.48939953T>C NG_033050.2 g.187890T>C NG_033050.1 g.187890T>C NG_008193.2 g.47928A>G NG_008193.1 g.47928A>G|SEQ=[T/C]|GENE=LHCGR STON1-GTF2A1L 286749 rs7354779 Strand: Allele origin: Allele change: Mutation type: snv NC_000021.9 g.44250887T>C NC_000021.8 g.45670770T>C NM_013369.3 c.832A>G NM_013369.4 c.832A>G NM_175867.2 c.832A>G NM_175867.3 c.832A>G NR_135514.1 n.75T>C NP_037501.2 p.Arg278Gly NP_787063.1 p.Arg278Gly|SEQ=[T/C]|GENE=DNMT3L DNMT3L-AS1 1053728 rs1801085 Strand: Allele origin: Allele change: Mutation type: snv NC_000007.14 g.27128971A>G NC_000007.13 g.27168590A>G NM_002141.4 c.*254T>C NM_002141.5 c.*254T>C|SEQ=[A/G]|GENE=HOXA3 HOXA4 3201 HOXA-AS2 285943 rs10762738 Strand: Allele origin: Allele change: Mutation type: snv NC_000010.11 g.76935709A>G NC_000010.10 g.78695467A>G NG_012270.1 g.707111T>C|SEQ=[A/G]|GENE=KCNMA1 KCNMA1-AS1 101929328 rs2656927 Strand: Allele origin: Allele change: Mutation type: snv NC_000019.10 g.4908263C>T NC_000019.9 g.4908275C>T NG_033256.2 g.10184C>T|SEQ=[C/T]|GENE=UHRF1 ARRDC5 645432 rs8103849 Strand: Allele origin: Allele change: Mutation type: snv NC_000019.10 g.4909617C>G NC_000019.9 g.4909629C>G NG_033256.2 g.11538C>G NM_001048201.3 c.-49C>G NM_001048201.2 c.-49C>G NM_001048201.1 c.-49C>G XM_011527942.2 c.-49C>G|SEQ=[C/G]|GENE=UHRF1 ARRDC5 645432 rs79822589 Strand: Allele origin: Allele change: Mutation type: snv NC_000001.11 g.86565961T>C NC_000001.10 g.87031644T>C NM_012128.4 c.895T>C NM_012128.3 c.895T>C XM_011541015.2 c.742T>C NR_024602.1 n.830T>C NR_024602.2 n.828T>C|SEQ=[T/C]|GENE=CLCA4 rs763334876 Strand: Allele origin: Allele change: Mutation type: snv NC_000001.11 g.86567425G>A NC_000001.10 g.87033108G>A NM_012128.4 c.956G>A NM_012128.3 c.956G>A XM_011541015.2 c.803G>A NR_024602.1 n.891G>A NR_024602.2 n.889G>A NP_036260.2 p.Gly319Asp XP_011539317.1 p.Gly268Asp|SEQ=[G/A]|GENE=CLCA4 rs759981524 Strand: Allele origin: Allele change: Mutation type: snv NC_000001.11 g.86579956A>C NC_000001.11 g.86579956A>G NC_000001.11 g.86579956A>T NC_000001.10 g.87045639A>C NC_000001.10 g.87045639A>G NC_000001.10 g.87045639A>T NM_012128.4 c.2371A>C NM_012128.4 c.2371A>G NM_012128.4 c.2371A>T NM_012128.3 c.2371A>C rs757773924 Strand: Allele origin: Allele change: Mutation type: snv NC_000001.11 g.86578055C>G NC_000001.11 g.86578055C>T NC_000001.10 g.87043738C>G NC_000001.10 g.87043738C>T NM_012128.4 c.2105C>G NM_012128.4 c.2105C>T NM_012128.3 c.2105C>G NM_012128.3 c.2105C>T XM_011541015.2 c.1952C>G XM_011541015.2 c.1952C>T NR_0 rs190628533 Strand: Allele origin: Allele change: Mutation type: snv NC_000001.11 g.86560300C>T NC_000001.10 g.87025983C>T NM_012128.4 c.390C>T NM_012128.3 c.390C>T XM_011541015.2 c.237C>T NR_024602.1 n.434C>T NR_024602.2 n.432C>T|SEQ=[C/T]|GENE=CLCA4 rs68073206 Strand: Allele origin: Allele change: Mutation type: snv NC_000002.12 g.48721568A>C NC_000002.11 g.48948707A>C NG_033050.2 g.196644A>C NG_033050.1 g.196644A>C NG_008193.2 g.39174T>G NG_008193.1 g.39174T>G|SEQ=[A/C]|GENE=LHCGR STON1-GTF2A1L 286749 rs12470652 Strand: Allele origin: Allele change: Mutation type: snv NC_000002.12 g.48694299T>C NC_000002.11 g.48921438T>C NG_033050.2 g.169375T>C NG_033050.1 g.169375T>C NG_008193.2 g.66443A>G NG_008193.1 g.66443A>G NM_000233.4 c.872A>G NM_000233.3 c.872A>G XM_005264309.3 c.-69A>G XM_017004089.1 c.617A>G XM_017004090 rs2293275 Strand: Allele origin: Allele change: Mutation type: snv NC_000002.12 g.48694236T>C NC_000002.12 g.48694236T>G NC_000002.11 g.48921375T>C NC_000002.11 g.48921375T>G NG_033050.2 g.169312T>C NG_033050.2 g.169312T>G NG_033050.1 g.169312T>C NG_033050.1 g.169312T>G NG_008193.2 g.66506A>G NG_008193.2 g.66506A>C rs6080550 Strand: Allele origin: Allele change: Mutation type: snv NC_000020.11 g.1778944C>G NC_000020.11 g.1778944C>T NC_000020.10 g.1759590C>G NC_000020.10 g.1759590C>T|SEQ=[C/G/T]|GENE=LOC100289473 rs4938723 Strand: Allele origin: Allele change: Mutation type: snv NC_000011.10 g.111511840T>C NC_000011.9 g.111382565T>C|SEQ=[T/C]|GENE=BTG4 MIR34B 407041 MIR34C 407042 LOC728196 728196 rs1800566 Strand: Allele origin: Allele change: Mutation type: snv NC_000016.10 g.69711242G>A NC_000016.9 g.69745145G>A NG_011504.2 g.20389C>T NG_011504.1 g.20389C>T NM_000903.3 c.559C>T NM_000903.2 c.559C>T NM_001025433.2 c.457C>T NM_001025433.1 c.457C>T NM_001025434.2 c.445C>T NM_001025434.1 c.445C>T NM_001286137. rs1799964 Strand: Allele origin: Allele change: Mutation type: snv NC_000006.12 g.31574531T>C NC_000006.11 g.31542308T>C NG_007462.1 g.3959T>C NG_012010.1 g.7433T>C NT_113891.3 g.3051818T>C NT_113891.2 g.3051924T>C NT_167246.2 g.2879572T>C NT_167246.1 g.2885192T>C NT_167249.2 g.2873811T>C NT_167249.1 g.2873109T>C NT rs4597581 Strand: Allele origin: Allele change: Mutation type: snv NC_000002.12 g.48731456A>G NC_000002.11 g.48958595A>G NG_033050.2 g.206532A>G NG_033050.1 g.206532A>G NG_008193.2 g.29286T>C NG_008193.1 g.29286T>C|SEQ=[A/G]|GENE=LHCGR STON1-GTF2A1L 286749 rs4953617 Strand: Allele origin: Allele change: Mutation type: snv NC_000002.12 g.48726070C>G NC_000002.12 g.48726070C>T NC_000002.11 g.48953209C>G NC_000002.11 g.48953209C>T NG_033050.2 g.201146C>G NG_033050.2 g.201146C>T NG_033050.1 g.201146C>G NG_033050.1 g.201146C>T NG_008193.2 g.34672G>C NG_008193.2 g.34672G>A rs3021522 Strand: Allele origin: Allele change: Mutation type: snv NC_000012.12 g.2799979C>G NC_000012.11 g.2909145C>G|SEQ=[C/G]|GENE=FKBP4 ITFG2-AS1 283440 rs8135823 Strand: Allele origin: Allele change: Mutation type: snv NC_000022.11 g.30126470T>G NC_000022.10 g.30522459T>G|SEQ=[T/G]|GENE=HORMAD2 rs11090601 Strand: Allele origin: Allele change: Mutation type: snv NC_000022.11 g.30171741A>C NC_000022.10 g.30567730A>C|SEQ=[A/C]|GENE=HORMAD2 rs4823073 Strand: Allele origin: Allele change: Mutation type: snv NC_000022.11 g.30116269G>A NC_000022.10 g.30512258G>A|SEQ=[G/A]|GENE=HORMAD2 rs9620953 Strand: Allele origin: Allele change: Mutation type: snv NC_000022.11 g.30150256C>T NC_000022.10 g.30546245C>T|SEQ=[C/T]|GENE=HORMAD2 rs9625930 Strand: Allele origin: Allele change: Mutation type: snv NC_000022.11 g.30152633G>A NC_000022.10 g.30548622G>A|SEQ=[G/A]|GENE=HORMAD2 rs975704 Strand: Allele origin: Allele change: Mutation type: snv NC_000022.11 g.30176747G>A NC_000022.10 g.30572736G>A NM_152510.3 c.*580G>A NM_152510.4 c.*580G>A NM_152510.2 c.*580G>A XM_011529917.3 c.*580G>A NM_001329457.1 c.*580G>A NM_001329457.2 c.*580G>A NM_001329458.1 c.*580G>A NM_001329458.2 c.*580G>A|SEQ=[ rs4588110 Strand: Allele origin: Allele change: Mutation type: snv NC_000019.10 g.1102140A>C NC_000019.10 g.1102140A>G NC_000019.10 g.1102140A>T NC_000019.9 g.1102139A>C NC_000019.9 g.1102139A>G NC_000019.9 g.1102139A>T NG_050621.1 g.3215A>C NG_050621.1 g.3215A>G NG_050621.1 g.3215A>T|SEQ=[A/C/G/T]|GENE=GPX4 rs3746165 Strand: Allele origin: Allele change: Mutation type: snv NC_000019.10 g.1102212A>G NC_000019.10 g.1102212A>T NC_000019.9 g.1102211A>G NC_000019.9 g.1102211A>T NG_050621.1 g.3287A>G NG_050621.1 g.3287A>T|SEQ=[A/G/T]|GENE=GPX4 rs3746166 Strand: Allele origin: Allele change: Mutation type: snv NC_000019.10 g.1102176C>T NC_000019.9 g.1102175C>T NG_050621.1 g.3251C>T|SEQ=[C/T]|GENE=GPX4 rs758130 Strand: Allele origin: Allele change: Mutation type: snv NC_000015.10 g.89330566A>G NC_000015.9 g.89873797A>G NG_008218.2 g.9230T>C|SEQ=[A/G]|GENE=POLG rs2238296 Strand: Allele origin: Allele change: Mutation type: snv NC_000015.10 g.89332098A>G NC_000015.9 g.89875329A>G NG_008218.2 g.7698T>C|SEQ=[A/G]|GENE=POLG rs144944885 Strand: Allele origin: Allele change: Mutation type: delins NC_000022.11 g.50776483del NC_000022.10 g.51214911del NW_004070876.1 g.11558del|SEQ=[G/-]|GENE=RABL2B RPL23AP82 284942 rs3788862 Strand: Allele origin: Allele change: Mutation type: snv NC_000023.11 g.43658116A>C NC_000023.11 g.43658116A>G NC_000023.10 g.43517364A>C NC_000023.10 g.43517364A>G NG_008957.2 g.6956A>C NG_008957.2 g.6956A>G|SEQ=[A/C/G]|GENE=MAOA |
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Protein Summary |
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Protein general information | P16442 Name: Histo blood group ABO system transferase (Fucosylglycoprotein 3 alpha galactosyltransferase) (Fucosylglycoprotein alpha N acetylgalactosaminyltransferase) (Glycoprotein fucosylgalactoside alpha N acetylgalactosaminyltransferase) (EC 2.4.1.40) (Glycoprotei Length: 354 Mass: 40934 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence |
MAEVLRTLAGKPKCHALRPMILFLIMLVLVLFGYGVLSPRSLMPGSLERGFCMAVREPDHLQRVSLPRMVYPQPK VLTPCRKDVLVVTPWLAPIVWEGTFNIDILNEQFRLQNTTIGLTVFAIKKYVAFLKLFLETAEKHFMVGHRVHYY VFTDQPAAVPRVTLGTGRQLSVLEVRAYKRWQDVSMRRMEMISDFCERRFLSEVDYLVCVDVDMEFRDHVGVEIL TPLFGTLHPGFYGSSREAFTYERRPQSQAYIPKDEGDFYYLGGFFGGSVQEVQRLTRACHQAMMVDQANGIEAVW HDESHLNKYLLRHKPTKVLSPEYLWDQQLLGWPAVLRKLRFTAVPKNHQAVRNP | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Structural information |
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Other Databases | GeneCards: ABO  Malacards: ABO | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene ontology
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KEGG pathways
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Diseases
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PubMed references
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