• Gene id: 79883

Gene Summary

• Gene Symbol: PODNL1   Gene   UCSC   Ensembl
• Aliases: SLRR5B
• Gene name: podocan like 1
• Alternate names: podocan-like protein 1,
• Gene location: 19p13.12 (13953391: 13931186)     Exons: 11     NC_000019.10
• OMIM: 610223

Protein Summary

• Protein general information: Q6PEZ8  
  • Name: Podocan like protein 1
  • Length: 512  
  • Mass: 56539
• Sequence:

  MAESGLAMWPSLLLLLLLPGPPPVAGLEDAAFPHLGESLQPLPRACPLRCSCPRVDTVDCDGLDLRVFPDNITRA
  AQHLSLQNNQLQELPYNELSRLSGLRTLNLHNNLISSEGLPDEAFESLTQLQHLCVAHNKLSVAPQFLPRSLRVA
  DLAANQVMEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFRGSEAIATLSLSNNQLSYLPPSLPPSLERLHLQN
  NLISKVPRGALSRQTQLRELYLQHNQLTDSGLDATTFSKLHSLEYLDLSHNQLTTVPAGLPRTLAILHLGRNRIR
  QVEAARLHGARGLRYLLLQHNQLGSSGLPAGALRPLRGLHTLHLYGNGLDRVPPALPRRLRALVLPHNHVAALGA
  RDLVATPGLTELNLAYNRLASARVHHRAFRRLRALRSLDLAGNQLTRLPMGLPTGLRTLQLQRNQLRMLEPEPLA
  GLDQLRELSLAHNRLRVGDIGPGTWHELQALQVRHRLVSHTVPRAPPSPCLPCHVPNILVSW

• Structural information:
  • Protein Domains: (37..7-)
    (/note="LRRNT"-)
  • Interpro: IPR001611  IPR025875  IPR003591  IPR032675  
  • Prosite: PS51450
  • STRING: ENSP00000345175
• Other Databases: GeneCards:  PODNL1  Malacards:  PODNL1

Gene ontology

GO accession	Term name	Evidence code	Go category
GO:0005615	extracellular space	IBA	cellular component
GO:0005576	extracellular region	IEA	cellular component
GO:0062023	collagen-containing extracellular matrix	IEA	cellular component

Diseases

Associated diseases	References
Cryptorchidism	MIK: 28606200
Spermatogenic defects	MIK: 31037746

PubMed references

PMID	Condition	Mutation	Ethnicity	Population details	Infertility_type	Associated_genes
28606200	Cryptorchidism			Monozgotic twins (1 control, I cwith cryptorchidism)	Male infertility	MeDIP-Seq
31037746	Spermatogenic defects			16 (1 control, 15 cases)	Male infertility	GSE6023 analyzed using GEO2R