• Gene id: 79171

Gene Summary

• Gene Symbol: RBM42   Gene   UCSC   Ensembl
• Gene name: RNA binding motif protein 42
• Alternate names: RNA-binding protein 42,
• Gene location: 19q13.12 (35629015: 35637685)     Exons: 10     NC_000019.10
• OMIM: 611612

Protein Summary

• Protein general information: Q9BTD8  
  • Name: RNA binding protein 42 (RNA binding motif protein 42)
  • Length: 480  
  • Mass: 50414
• Sequence:

  MAGAGPAPGLPGAGGPVVPGPGAGIPGKSGEERLKEMEAEMALFEQEVLGAPVPGIPTAVPAVPTVPTVPTVEAM
  QVPAAPVIRPIIATNTYQQVQQTLEARAAAAATVVPPMVGGPPFVGPVGFGPGDRSHLDSPEAREAMFLRRAAVA
  PQRAPILRPAFVPHVLQRADSALSSAAAGPRPMALRPPHQALVGPPLPGPPGPPMMLPPMARAPGPPLGSMAALR
  PPLEEPAAPRELGLGLGLGLKEKEEAVVAAAAGLEEASAAVAVGAGGAPAGPAVIGPSLPLALAMPLPEPEPLPL
  PLEVVRGLLPPLRIPELLSLRPRPRPPRPEPPPGLMALEVPEPLGEDKKKGKPEKLKRCIRTAAGSSWEDPSLLE
  WDADDFRIFCGDLGNEVNDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMREMNGKYVGSR
  PIKLRKSMWKDRNLDVVRKKQKEKKKLGLR

• Structural information:
  • Protein Domains: (381..45-)
    (/note="RRM-)
    (/evidence="ECO:0000255|PROSITE-ProRule:PRU00176"-)
  • Interpro: IPR012677  IPR035979  IPR034215  IPR000504  
  • Prosite: PS50102
  • CDD: cd12383
  • PDB: 6QW6 6QX9
  • PDBsum: 6QW6 6QX9
  • STRING: ENSP00000262633
• Other Databases: GeneCards:  RBM42  Malacards:  RBM42

Gene ontology

GO accession	Term name	Evidence code	Go category
GO:0003723	RNA binding	IBA	molecular function
GO:0048024	regulation of mRNA splicing, via spliceosome	IBA	biological process
GO:1990904	ribonucleoprotein complex	IBA	cellular component
GO:0003676	nucleic acid binding	IEA	molecular function
GO:0005737	cytoplasm	IEA	cellular component
GO:0005634	nucleus	IEA	cellular component
GO:0003723	RNA binding	IEA	molecular function
GO:0005515	protein binding	IPI	molecular function
GO:0005515	protein binding	IPI	molecular function
GO:0005515	protein binding	IPI	molecular function
GO:0005515	protein binding	IPI	molecular function
GO:0005515	protein binding	IPI	molecular function
GO:0005515	protein binding	IPI	molecular function
GO:0048025	negative regulation of mRNA splicing, via spliceosome	IEA	biological process
GO:0005737	cytoplasm	IEA	cellular component
GO:0005634	nucleus	IEA	cellular component
GO:0003723	RNA binding	HDA	molecular function

Diseases

Associated diseases	References
Cryptorchidism	MIK: 28606200

PubMed references

PMID	Condition	Mutation	Ethnicity	Population details	Infertility_type	Associated_genes
28606200	Cryptorchidism			Monozgotic twins (1 control, I cwith cryptorchidism)	Male infertility	MeDIP-Seq